The Diagnostic Journey: Gathering the Evidence
At a Glance
GEFS+ is diagnosed by combining a child's seizure pattern, family history, clinical evaluation, and genetic testing. A normal early EEG or MRI does not rule it out, and an SCN1A variant alone does not establish Dravet syndrome.
Getting a diagnosis for Genetic Epilepsy with Febrile Seizures Plus (GEFS+) is rarely a single event. Instead, it is a process of gathering evidence from your family’s history, your child’s clinical symptoms, and advanced genetic testing [1]. Because the symptoms can change as a child grows, the diagnosis may evolve over time [2].
The Clinical Foundation: Your Story
The most important diagnostic tool is the clinical history. Your doctor will ask for a “pedigree”—a detailed family tree—to see if other relatives had childhood seizures, even if they were only mild “fever fits” [3][4]. Because GEFS+ has incomplete penetrance, family history alone cannot establish carrier status, but it provides vital context [1].
Genetic Testing: More Than Just SCN1A
While SCN1A is the most common gene involved, testing for just one gene is often not enough.
- Epilepsy Panels: These tests look at hundreds of genes known to cause seizures simultaneously [5]. Panel testing should be selected with genetics professionals.
- Exome or Genome Sequencing: These tests look at almost all of a child’s DNA [2]. This is often used if a panel comes back negative, as it can find rarer or “de novo” (new) mutations [6][7].
Important: Finding a mutation in the SCN1A gene does not automatically mean your child has Dravet syndrome [8]. SCN1A mutations cause a range of conditions, and many children with these variants have the much milder GEFS+ phenotype [9].
Why Early Tests Often Look “Normal”
It can be confusing and even frustrating when your child is having seizures but their brain scans and electrical tests come back normal. In the early stages of GEFS+, this is actually very common [10].
- EEG (Electroencephalogram): This test records brain waves. In the first year of life, many children with GEFS+ or even early Dravet syndrome have a normal EEG [11][10]. A normal result does not rule out epilepsy, and there is no fixed schedule for repeating a normal EEG.
- MRI (Magnetic Resonance Imaging): An MRI looks at the physical structure of the brain. In GEFS+, the brain’s structure is typically normal [12]. While an MRI is not routinely required for every child with a simple febrile seizure, it may be used to rule out other causes (like a tumor or injury) [13].
Your Genetic Report Checklist
When you receive your child’s genetic test results, ensure it includes these specific details. If any are missing, ask your neurologist or a genetic counselor to clarify:
- Gene Name: (e.g., SCN1A, GABRG2)
- Variant Nomenclature: This looks like a code (e.g., c.123G>A) and tells you exactly where the change is [14].
- Zygosity: Usually “heterozygous,” meaning the child has one normal copy and one changed copy of the gene [15].
- Classification: Is it Pathogenic (proven to cause disease), Likely Pathogenic, or a Variant of Uncertain Significance (VUS)? A VUS is an “inconclusive” result that needs more research [16][17]. A VUS should not be used by itself to diagnose GEFS+, guide medication, or make predictive decisions.
- Inheritance Status: Did the test include the parents (Trio testing)? This tells you if the variant was inherited or is de novo (new to the child) [18][19]. Note that a negative parent blood test does not completely exclude parental mosaicism.
- CNV Coverage: Did the lab check for large missing or extra pieces of the gene (called Copy Number Variants) [20][5]?
By keeping a thorough record of your child’s seizures and a copy of their full genetic report, you provide the “evidence” your care team needs to tailor their treatment plan [21].
Common questions in this guide
How is GEFS+ diagnosed?
Can a normal EEG rule out GEFS+?
What does a normal MRI mean when GEFS+ is suspected?
Does an SCN1A mutation mean my child has Dravet syndrome?
What does a VUS mean on an epilepsy genetic test?
What information should be included in a GEFS+ genetic report?
Can GEFS+ run in families?
Questions For You
Answer a question to get research tailored to you. Your answers are private.
Get notified when new evidence is published on Genetic epilepsy with febrile seizure plus.
We monitor PubMed for new peer-reviewed studies on this topic and email a short summary when something meaningful changes.
Questions to Ask Your Doctor
Curated prompts to bring to your next appointment.
- 1.How many genes were tested in the panel you ordered, and did it include a check for large deletions or duplications (Copy Number Variants)?
- 2.Given that the early EEG and MRI were normal, how often should we repeat these tests as my child gets older?
- 3.Can you explain why this specific genetic variant was classified as 'Likely Pathogenic' versus a 'Variant of Uncertain Significance'?
- 4.Does the genetic report show if this was a 'de novo' mutation or if it was inherited from one of us, and why does that matter for our other children?
- 5.Based on my child's seizure pattern and the genetic results, why do you believe this is GEFS+ rather than a different condition?
References
References (21)
- 1
Genetic epilepsy with febrile seizures plus: Refining the spectrum.
Zhang YH, Burgess R, Malone JP, et al.
Neurology 2017; (89(12)):1210-1219 doi:10.1212/WNL.0000000000004384.
PMID: 28842445 - 2
Clinical and genetics spectrum of 392 Chinese patients with genetic epilepsy with febrile seizures plus.
Chen S, Quan Y, Yin F, Peng J
Journal of neurology 2025; (273(1)):18.
PMID: 41366559 - 3
H258R mutation in KCNAB3 gene in a family with genetic epilepsy and febrile seizures plus.
Ding J, Miao QF, Zhang JW, et al.
Brain and behavior 2020; (10(12)):e01859 doi:10.1002/brb3.1859.
PMID: 32990398 - 4
A SCN1A missense variant (c.4522T>A, p.(Tyr1508Asn) associated with genetic epilepsy with febrile seizures plus: clinical phenotype and genetic analysis of a Chinese pedigree.
Li XL
Frontiers in genetics 2026; (17()):1746234 doi:10.3389/fgene.2026.1746234.
PMID: 41788412 - 5
Diagnostic efficiency of exome-based sequencing in pediatric patients with epilepsy.
Zou H, Zhang Q, Liao J, et al.
Frontiers in genetics 2024; (15()):1496411 doi:10.3389/fgene.2024.1496411.
PMID: 39906551 - 6
Genetic diagnoses in epilepsy: The impact of dynamic exome analysis in a pediatric cohort.
Rochtus A, Olson HE, Smith L, et al.
Epilepsia 2020; (61(2)):249-258 doi:10.1111/epi.16427.
PMID: 31957018 - 7
SCN1A Variants as the Underlying Cause of Genetic Epilepsy with Febrile Seizures Plus in Two Multi-Generational Colombian Families.
Cornejo-Sanchez DM, Acharya A, Bharadwaj T, et al.
Genes 2022; (13(5)) doi:10.3390/genes13050754.
PMID: 35627139 - 8
Development and Validation of a Prediction Model for Early Diagnosis of SCN1A-Related Epilepsies.
Brunklaus A, Pérez-Palma E, Ghanty I, et al.
Neurology 2022; (98(11)):e1163-e1174 doi:10.1212/WNL.0000000000200028.
PMID: 35074891 - 9
Genotype-phenotype associations in 1018 individuals with SCN1A-related epilepsies.
Gallagher D, Pérez-Palma E, Bruenger T, et al.
Epilepsia 2024; (65(4)):1046-1059 doi:10.1111/epi.17882.
PMID: 38410936 - 10
Characterizing SCN1A-Related Disorders Using Real-World Data Across 681 Patient-Years.
Prentice AJ, McSalley I, Magielski JH, et al.
medRxiv : the preprint server for health sciences 2026; doi:10.64898/2026.02.24.26346493.
PMID: 41867217 - 11
Age-related evolution of EEG in Dravet syndrome: Meta-analysis of 155 patients.
Minato E, Myers KA
Seizure 2021; (91()):108-111 doi:10.1016/j.seizure.2021.06.007.
PMID: 34147886 - 12
SCN1A-related phenotypes: Epilepsy and beyond.
Scheffer IE, Nabbout R
Epilepsia 2019; (60 Suppl 3()):S17-S24 doi:10.1111/epi.16386.
PMID: 31904117 - 13
Magnetic resonance imaging findings in SCN1A-related epilepsies and Dravet syndrome: A systematic review.
Falsitta LV, Cross H, Lindan C, et al.
Epilepsia 2025; (66(6)):1793-1803 doi:10.1111/epi.18344.
PMID: 40019774 - 14
A variant by any name: quantifying annotation discordance across tools and clinical databases.
Yen JL, Garcia S, Montana A, et al.
Genome medicine 2017; (9(1)):7 doi:10.1186/s13073-016-0396-7.
PMID: 28122645 - 15
Diagnostic outcomes for genetic testing of 70 genes in 8565 patients with epilepsy and neurodevelopmental disorders.
Lindy AS, Stosser MB, Butler E, et al.
Epilepsia 2018; (59(5)):1062-1071 doi:10.1111/epi.14074.
PMID: 29655203 - 16
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Richards S, Aziz N, Bale S, et al.
Genetics in medicine : official journal of the American College of Medical Genetics 2015; (17(5)):405-24 doi:10.1038/gim.2015.30.
PMID: 25741868 - 17
A Retrospective Review of Reclassification of Variants of Uncertain Significance in a Pediatric Epilepsy Cohort Undergoing Genetic Panel Testing.
Chourasia N, Vaidya R, Sengupta S, et al.
Pediatric neurology 2024; (161()):101-107 doi:10.1016/j.pediatrneurol.2024.09.009.
PMID: 39357456 - 18
Genetic testing for familial epilepsies: Diagnostic yield and genetic findings.
Ellis CA, Copeland J, Velez I, et al.
Epilepsia 2026; (67(6)):3048-3057 doi:10.1002/epi.70160.
PMID: 41795712 - 19
De novo KCNK4 variant caused epilepsy with febrile seizures plus, neurodevelopmental abnormalities, and hypertrichosis.
Yan HJ, Liu WH, Xu MX, et al.
Frontiers in genetics 2025; (16()):1499716 doi:10.3389/fgene.2025.1499716.
PMID: 40230348 - 20
Development of Criteria for Epilepsy Genetic Testing in Ontario, Canada.
Jain P, Andrade D, Donner E, et al.
The Canadian journal of neurological sciences. Le journal canadien des sciences neurologiques 2019; (46(1)):7-13 doi:10.1017/cjn.2018.341.
PMID: 30419982 - 21
Possible precision medicine implications from genetic testing using combined detection of sequence and intragenic copy number variants in a large cohort with childhood epilepsy.
Truty R, Patil N, Sankar R, et al.
Epilepsia open 2019; (4(3)):397-408 doi:10.1002/epi4.12348.
PMID: 31440721
This page is for informational purposes only and does not constitute medical advice. A pediatric neurologist and genetic counselor should interpret your child's GEFS+ results and guide care.