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Neonatology · Hypoxic-Ischemic Encephalopathy

How Doctors Diagnose HIE

At a Glance

Doctors diagnose Hypoxic-Ischemic Encephalopathy (HIE) by assessing a newborn's clinical distress at birth, such as cord blood acidosis, and performing a neurologic exam called the Sarnat Scale. An MRI is later used to confirm structural brain changes and guide long-term care planning.

In the first hours after birth, you may hear several different terms used by the medical team. Understanding how doctors arrive at a diagnosis of Hypoxic-Ischemic Encephalopathy (HIE) is a key part of navigating your baby’s care.

Neonatal Encephalopathy vs. HIE

It is common for doctors to initially use the term Neonatal Encephalopathy (NE). This is a broad “umbrella term” used to describe a baby who is showing signs of altered brain function, such as being very sleepy, having low muscle tone, or experiencing seizures.

HIE is a specific type of encephalopathy caused by a lack of oxygen and blood flow. Because other conditions can look exactly like HIE, doctors must use a structured evaluation to confirm the diagnosis and rule out “mimics,” such as genetic disorders, infections, or metabolic conditions [1][2].

The Sarnat Scale: Grading Severity

The most important tool doctors use to diagnose HIE is a physical neurologic exam called Sarnat Staging [3]. This allows the team to grade the severity of the encephalopathy into three categories:

  • Stage I (Mild): The baby may be irritable, hyper-alert, or have slightly increased muscle tone (hypertonia). At this stage, babies usually do not have seizures and often feed well shortly after birth [1].
  • Stage II (Moderate): The baby is typically very lethargic or sleepy and has low muscle tone (hypotonia). Seizures are common in this stage, and the baby may have weak or absent reflexes [4].
  • Stage III (Severe): The baby may be in a coma (completely unresponsive to touch) and appear very limp (flaccidity). Reflexes are usually absent.

The Diagnostic Process

To confirm a diagnosis of HIE and decide if a baby is eligible for treatments like therapeutic hypothermia (cooling), doctors generally look for two sets of evidence:

  1. Clinical Distress (Criteria A): This involves looking at the baby’s health at the exact moment of birth. Doctors check for a low pH or a high base deficit (markers of acid in the blood) in the umbilical cord blood or the baby’s first blood sample. They also consider if the baby needed significant help breathing or had a low Apgar score [5].
  2. Neurologic Evidence (Criteria B): This is the Sarnat exam. Cooling treatment is currently the standard of care only for babies with moderate-to-severe (Stage II or III) HIE [5][6].

Ruling Out “Mimics”

Because some genetic mutations or metabolic disorders can cause a baby to appear lethargic or have seizures just like HIE, the medical team may perform genetic and metabolic testing [7].

Ruling out these “mimics” is vital because:

  • Treatment differs: Genetic or metabolic conditions often require specific medications or diets rather than cooling [7].
  • Prognosis changes: Understanding the exact cause helps doctors provide more accurate information about your baby’s future development [8].
  • Future planning: Knowing if a condition is genetic can be important for families planning future pregnancies [7].

Later, usually between day 4 and 10, an MRI will be used to look at the brain’s structure. This provides the “final piece of the puzzle” by showing exactly which areas of the brain were affected, helping the team plan for your baby’s long-term care [9].


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Common questions in this guide

What is the difference between Neonatal Encephalopathy and HIE?
Neonatal Encephalopathy is a broad umbrella term used when a newborn shows signs of altered brain function, such as lethargy or seizures. HIE is a specific type of encephalopathy caused by a lack of oxygen and blood flow around the time of birth.
What is the Sarnat Scale for newborns?
The Sarnat Scale is a physical neurologic exam doctors use to grade the severity of a baby's brain injury into mild, moderate, or severe stages. It evaluates a baby's alertness, muscle tone, reflexes, and whether they are experiencing seizures.
Why do doctors check cord blood gas and pH levels?
Doctors check cord blood gas or the baby's first blood sample to look for acidosis, which is a marker of clinical distress at birth. These results help confirm an HIE diagnosis and determine if the baby is eligible for cooling therapy.
Why might my baby need genetic or metabolic testing if they have HIE?
Some genetic or metabolic disorders can mimic the symptoms of HIE. Doctors perform testing to rule out these other conditions because they require completely different medical treatments and diets than HIE.
When is an MRI used to diagnose HIE?
An MRI is typically performed between days 4 and 10 of life to examine the brain's structure. This imaging helps the medical team see exactly which areas of the brain were affected, providing crucial information to plan your baby's long-term care.

Questions to Ask Your Doctor

Curated prompts to bring to your next appointment.

  1. 1.Which Sarnat Stage (mild, moderate, or severe) does my baby currently fall into based on their exam?
  2. 2.What were the specific 'Criteria A' (blood gas/acidosis) and 'Criteria B' (neurologic signs) results that led to this diagnosis?
  3. 3.Are you performing genetic or metabolic testing to rule out other causes that might mimic HIE?
  4. 4.Has an aEEG or EEG shown any seizure activity, even if it isn't visible to us?
  5. 5.How will the findings from the upcoming MRI help clarify the diagnosis and the long-term plan?

Questions For You

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References

References (9)
  1. 1

    Neonatal Encephalopathy: Beyond Hypoxic-Ischemic Encephalopathy.

    Russ JB, Simmons R, Glass HC

    NeoReviews 2021; (22(3)):e148-e162 doi:10.1542/neo.22-3-e148.

    PMID: 33649088
  2. 2

    MECP2 Gene-Related Severe Neonatal Encephalopathy: A Rare Case in a Female Neonate.

    Devi R, Gupta D, Rc PK, et al.

    Cureus 2026; (18(1)):e101620 doi:10.7759/cureus.101620.

    PMID: 41694936
  3. 3

    Hypoxic Ischemic Encephalopathy Indicators of Sarnat and Sarnat Scoring in Neonatal Subjects with Perinatal Asphyxia.

    Sadeghi Moghaddam P, Aghaali M, Modarresy SZ, et al.

    Iranian journal of child neurology 2024; (18(1)):81-91 doi:10.22037/ijcn.v17i2.36967.

    PMID: 38375125
  4. 4

    Prevalence, severity and early outcomes of hypoxic ischemic encephalopathy among newborns at a tertiary hospital, in northern Tanzania.

    Simiyu IN, Mchaile DN, Katsongeri K, et al.

    BMC pediatrics 2017; (17(1)):131 doi:10.1186/s12887-017-0876-y.

    PMID: 28545428
  5. 5

    Hypothermia for newborns with hypoxic-ischemic encephalopathy.

    Lemyre B, Chau V

    Paediatrics & child health 2018; (23(4)):285-291 doi:10.1093/pch/pxy028.

    PMID: 30657134
  6. 6

    Hypothermia therapy for newborns with hypoxic ischemic encephalopathy.

    Silveira RC, Procianoy RS

    Jornal de pediatria 2015; (91(6 Suppl 1)):S78-83.

    PMID: 26354871
  7. 7

    Neonatal encephalopathy: Etiologies other than hypoxic-ischemic encephalopathy.

    Sandoval Karamian AG, Mercimek-Andrews S, Mohammad K, et al.

    Seminars in fetal & neonatal medicine 2021; (26(5)):101272 doi:10.1016/j.siny.2021.101272.

    PMID: 34417137
  8. 8

    Identifying Genetic Susceptibility in Neonates With Hypoxic-Ischemic Encephalopathy: A Retrospective Case Series.

    Woodward KE, Murthy P, Mineyko A, et al.

    Journal of child neurology 2023; (38(1-2)):16-24 doi:10.1177/08830738221147805.

    PMID: 36628482
  9. 9

    Prognostic Value of Brain Magnetic Resonance Imaging in Neonatal Hypoxic-Ischemic Encephalopathy: A Meta-analysis.

    Sánchez Fernández I, Morales-Quezada JL, Law S, Kim P

    Journal of child neurology 2017; (32(13)):1065-1073 doi:10.1177/0883073817726681.

    PMID: 28925315

This page explains the HIE diagnostic process for educational purposes. Always consult your neonatologist or pediatric neurologist regarding your baby's specific diagnosis, test results, and care plan.

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