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Clinical Immunology · Immunodeficiency 89

Immunodeficiency 89 (IKZF3 Deficiency): A Patient Guide

At a Glance

Immunodeficiency 89, also called IKZF3 deficiency or AIOLOS deficiency, is a rare inherited condition that weakens B- and T-cell immune function. Care centers on immunoglobulin replacement, preventive medicines, and close monitoring for serious infections and immune dysregulation.

Immunodeficiency 89, also known as IKZF3 deficiency or AIOLOS deficiency, is an exceptionally rare genetic condition that affects the foundation of the immune system. At its core, the condition is caused by a change in the IKZF3 gene, which is responsible for producing a protein called AIOLOS [1]. In a healthy body, AIOLOS acts as a vital “control switch” that tells white blood cells how to grow, mature, and eventually fight off germs [2]. Because this mutation is autosomal dominant, a single altered copy of the gene is enough to disrupt this process, often by creating a “broken” protein that prevents the healthy version from doing its job [3][1].

This condition is classified as a combined immunodeficiency, meaning it weakens both the B cells, which produce protective antibodies, and the T cells, which coordinate the body’s entire immune response [1]. This dual defect leaves the body vulnerable to a wide range of threats. Children with this diagnosis may experience frequent, stubborn infections of the ears and lungs, as well as “opportunistic” infections like Pneumocystis jirovecii pneumonia (PJP)—a type of fungal lung infection that usually only affects people with significant T-cell issues [1][3]. Beyond infections, some children may struggle with chronic diarrhea or a difficulty gaining weight, often referred to as failure to thrive or poor weight gain [3].

Because the body cannot reliably protect itself, the standard of care focuses on building a “safety net” around the immune system. This often includes Immunoglobulin Replacement Therapy (IgRT), which provides the body with the antibodies it cannot make on its own, and daily or weekly preventative (prophylactic) medications to stop dangerous germs from taking hold [4][5]. It is important to understand that while IgRT helps prevent bacterial infections, it does not repair the T-cell defect or guarantee protection from opportunistic infections like PJP. While these treatments help manage the day-to-day risks, doctors also maintain a long-term watch for signs of immune dysregulation—a state where the immune system becomes “confused” and may cause organ enlargement or, as seen in a limited number of adult relatives, potential long-term risks like blood-related cancers [2][1].

Living with such a rare diagnosis means your family is part of a very small global community of patients and researchers. Because the condition was only first identified in 2021, the medical understanding of IKZF3 deficiency is growing every year [1]. Your child’s medical team will use the most current general guidelines for immune disorders to tailor a plan that fits your child’s specific needs [4]. While the road ahead requires careful monitoring and many protective measures, these steps are designed to allow your child to grow, learn, and live as fully as possible while the science continues to advance.

Common questions in this guide

What is Immunodeficiency 89, also called IKZF3 deficiency?
Immunodeficiency 89 is a very rare inherited combined immunodeficiency caused by a change in the IKZF3 gene. The change affects AIOLOS, a protein that helps B cells and T cells develop and function, so the body may have trouble making antibodies and coordinating immune defenses.
What infections and symptoms can IKZF3 deficiency cause?
Children may have repeated or difficult-to-treat ear and lung infections, and some develop opportunistic infections such as Pneumocystis jirovecii pneumonia (PJP). Chronic diarrhea and poor weight gain, sometimes called failure to thrive, can also occur.
How is IKZF3 deficiency treated and infection risk reduced?
Immunoglobulin replacement therapy supplies antibodies that the body may not make reliably, while prophylactic medicines help prevent certain infections. IgRT can help prevent bacterial infections, but it does not repair the T-cell defect or guarantee protection from opportunistic infections such as PJP.
Can IKZF3 deficiency cause immune dysregulation or autoimmunity?
IKZF3 deficiency can involve immune dysregulation, meaning immune activity becomes abnormal in addition to the problem fighting infections. The available clinical information highlights possible organ enlargement and potential blood-related cancer risks in a limited number of adult relatives; it does not indicate that every child will develop an autoimmune condition. A child's immunology team should evaluate new or unusual symptoms.
Is Immunodeficiency 89 inherited, and could it affect relatives?
Yes. It is autosomal dominant, meaning that one altered copy of IKZF3 can be enough to cause the condition. A history of similar infections or immune problems in relatives should be shared with the child's care team.
What monitoring does a child with IKZF3 deficiency need?
Monitoring may include blood counts, physical examinations, infection history, and checks for signs of immune dysregulation or organ enlargement. Because IKZF3 deficiency is exceptionally rare and research is evolving, a specialized immunology center may help the team apply current immune-disorder guidance.

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References

References (5)
  1. 1

    T and B cell abnormalities, pneumocystis pneumonia, and chronic lymphocytic leukemia associated with an AIOLOS defect in patients.

    Kuehn HS, Chang J, Yamashita M, et al.

    The Journal of experimental medicine 2021; (218(12)) doi:10.1084/jem.20211118.

    PMID: 34694366
  2. 2

    AIOLOS-Associated Inborn Errors of Immunity.

    Yamashita M, Morio T

    Journal of clinical immunology 2024; (44(6)):128 doi:10.1007/s10875-024-01730-9.

    PMID: 38773004
  3. 3

    Identification and Functional Analysis of a de novo IKZF3 Mutation in a Pediatric Patient with Combined Immunodeficiency.

    Shi X, Cao X, Huang M, et al.

    Journal of clinical immunology 2024; (44(5)):117 doi:10.1007/s10875-024-01706-9.

    PMID: 38758229
  4. 4

    Practice parameter for inborn errors of immunity: What is new in the 2025 update.

    Chinen J, Horner CC, Orange JS

    The Journal of allergy and clinical immunology 2026; (158(2)):368-373 doi:10.1016/j.jaci.2026.05.014.

    PMID: 42208906
  5. 5

    ECIL guidelines for preventing Pneumocystis jirovecii pneumonia in patients with haematological malignancies and stem cell transplant recipients.

    Maertens J, Cesaro S, Maschmeyer G, et al.

    The Journal of antimicrobial chemotherapy 2016; (71(9)):2397-404 doi:10.1093/jac/dkw157.

    PMID: 27550992

This page is for informational purposes only and does not constitute medical advice. Your child's immunologist and care team should interpret genetic and immune-test results and plan infection prevention and monitoring for your child.