Skip to content
PubMed This is a summary of 13 peer-reviewed journal articles Updated
Neurology · Septo-Optic Dysplasia

The Origins of Septo-Optic Dysplasia: Genetics and Beyond

At a Glance

Septo-Optic Dysplasia (SOD) is primarily a sporadic, unpredictable developmental event that occurs very early in the first trimester. While rare genetic mutations exist, most cases are not inherited. SOD is not caused by a parent's actions or lifestyle choices during pregnancy.

When a child is diagnosed with Septo-Optic Dysplasia (SOD), one of the first questions parents often ask is: “Why did this happen?” Understanding the causes of SOD is an ongoing area of medical research. Currently, doctors view SOD not as a single disease with one cause, but as a phenotypic endpoint—a common destination reached through many different developmental paths [1][2].

The Genetic Puzzle

While researchers have identified several genes involved in the development of the brain’s midline and the pituitary gland, genetic mutations are only found in a small minority of children with SOD [1][3].

Key genes that have been linked to SOD include:

  • HESX1: One of the first genes discovered to be associated with SOD; it plays a role in early pituitary and forebrain development [4][5].
  • SOX2: Mutations in this gene can lead to SOD-like features, including growth hormone deficiency and eye abnormalities [6][3].
  • SOX3, SHH, and OTX2: Other genes involved in the complex “blueprint” of the early brain [3][7].

Why do most patients lack these mutations?
The vast majority of SOD cases are sporadic, meaning they occur by chance without a clear genetic mutation being passed down or identified [1][8]. This suggests that SOD is multifactorial, involving a complex interplay between various genes and the early environment within the womb [1][9].

Environmental and Maternal Factors

Researchers have looked for patterns to understand why some children develop SOD. Some studies have noted associations with factors such as younger maternal age or specific environmental conditions (such as prenatal exposure to certain anti-seizure medications like valproic acid), but these are broad trends and do not explain every single case [10][11].

Other theories suggest that SOD might sometimes be caused by a vascular disruption—a brief change in blood flow during a critical window of early embryonic development [10][8]. Because this happens so early, often before a person even knows they are pregnant, it is usually a random event.

A Message for Parents: It Is Not Your Fault

It is very common for parents to feel a sense of guilt or to search for something they might have done “wrong” during pregnancy. It is essential to understand:

  • SOD is a developmental event: The brain structures involved in SOD form extremely early in the first trimester [8].
  • It is not caused by parental actions: There is no evidence that standard daily activities, stress, or common lifestyle choices cause SOD [1][12].
  • It is a “stochastic” event: This is a medical term for a random, unpredictable occurrence in nature [13].

Understanding that SOD is a complex, diverse spectrum helps shift the focus from “why it happened” to “how we can support this child now” [12][9]. Your child’s medical team is there to help manage the symptoms and support their growth, regardless of the underlying cause.

Common questions in this guide

Is Septo-Optic Dysplasia hereditary?
While a small percentage of cases involve mutations in genes like HESX1 or SOX2, the vast majority of Septo-Optic Dysplasia cases are sporadic. This means they happen by chance and are not typically passed down from parents.
Did I do something during pregnancy to cause my child's SOD?
No. Septo-Optic Dysplasia is a developmental event that occurs extremely early in the first trimester, often before a person even knows they are pregnant. There is no evidence that stress, standard daily activities, or lifestyle choices cause SOD.
If it isn't genetic, what causes Septo-Optic Dysplasia?
Most cases are considered multifactorial, meaning they result from a complex interaction between genetics and the early womb environment. Some theories suggest a temporary disruption in blood flow to the embryo during a critical developmental window may play a role.
Should my child undergo genetic testing for SOD?
Genetic testing can identify specific mutations in a minority of children, which may provide more information about their condition. You should discuss with your doctor whether testing could guide your child's medical management or assist with your family's future planning.

Questions for Your Doctor

4 questions

  • Has my child had genetic testing to look for mutations in genes like HESX1 or SOX2?
  • If a genetic test comes back negative, what does that mean for our family's future planning?
  • Are there any other physical features my child has that might suggest a specific genetic pattern?
  • Does the cause of my child's SOD (genetic vs. unknown) change the way we manage their care?

Questions for You

3 questions

  • Am I feeling a sense of responsibility for this diagnosis, and have I discussed these feelings with a counselor or my doctor?
  • What family history information (e.g., eye conditions or hormone issues) have I shared with the medical team?
  • What are my goals for genetic testing—is it for information, or to help guide future family planning?

References

References (13)
  1. 1

    Review of the MRI brain findings of septo-optic dysplasia.

    Ward DJ, Connolly DJA, Griffiths PD

    Clinical radiology 2021; (76(2)):160.e1-160.e14 doi:10.1016/j.crad.2020.09.007.

    PMID: 33019967
  2. 2

    The clinical aspects of septo-optic dysplasia: A narrative review with illustrative case report.

    Al-Salihi MM, Qassim T, Aji N, et al.

    International journal of surgery case reports 2023; (109()):108575 doi:10.1016/j.ijscr.2023.108575.

    PMID: 37524018
  3. 3

    Novel Genetic Diagnoses in Septo-Optic Dysplasia.

    Reis LM, Seese S, Maheshwari M, et al.

    Genes 2022; (13(7)) doi:10.3390/genes13071165.

    PMID: 35885948
  4. 4

    Characterization of a novel HESX1 mutation in a pediatric case of septo-optic dysplasia.

    Pozzi S, Tan WH, Martinez-Barbera J

    Clinical case reports 2017; (5(4)):463-470 doi:10.1002/ccr3.868.

    PMID: 28396770
  5. 5

    Biological pathways leading to septo-optic dysplasia: a review.

    Pasca L, Politano D, Morelli F, et al.

    Orphanet journal of rare diseases 2025; (20(1)):157 doi:10.1186/s13023-025-03541-6.

    PMID: 40181463
  6. 6

    Growth hormone deficiency in a case of septo-optic-dysplasia due to SOX2 mutation: should we re-test patients during the transition period?

    Gasco V, Matarazzo P, De Sanctis L, Ghigo E

    BMJ case reports 2022; (15(12)) doi:10.1136/bcr-2022-251897.

    PMID: 36581364
  7. 7

    Septo-optic dysplasia caused by a novel FLNA splice site mutation: a case report.

    Fernández-Marmiesse A, Pérez-Poyato MS, Fontalba A, et al.

    BMC medical genetics 2019; (20(1)):112 doi:10.1186/s12881-019-0844-5.

    PMID: 31234783
  8. 8

    Septo-optic dysplasia with amniotic band syndrome sequence: a case report.

    Amiji IA, Mohamed UH, Rutashobya AG, et al.

    Journal of medical case reports 2019; (13(1)):370 doi:10.1186/s13256-019-2306-2.

    PMID: 31839004
  9. 9

    Pituitary abnormalities in midline brain defects.

    Zucchini S

    EClinicalMedicine 2020; (19()):100260 doi:10.1016/j.eclinm.2020.100260.

    PMID: 32021967
  10. 10

    Increasing incidence of optic nerve hypoplasia/septo-optic dysplasia spectrum: Geographic clustering in Northern Canada.

    Khaper T, Bunge M, Clark I, et al.

    Paediatrics & child health 2017; (22(8)):445-453 doi:10.1093/pch/pxx118.

    PMID: 29479262
  11. 11

    Septo-optic dysplasia and gastroschisis: trends in birth prevalence and association with maternal age.

    Cullingford DJ, Abraham MB, Siafarikas A, et al.

    European journal of pediatrics 2025; (184(5)):297 doi:10.1007/s00431-025-06118-4.

    PMID: 40229431
  12. 12

    Neuro-Ophthalmological Manifestations Of Septo-Optic Dysplasia: Current Perspectives.

    Ganau M, Huet S, Syrmos N, et al.

    Eye and brain 2019; (11()):37-47 doi:10.2147/EB.S186307.

    PMID: 31695544
  13. 13

    Endocrine Dysfunction in Children with Zika-Related Microcephaly Who Were Born during the 2015 Epidemic in the State of Pernambuco, Brazil.

    Veras Gonçalves A, Miranda-Filho DB, Rocha Vilela LC, et al.

    Viruses 2020; (13(1)) doi:10.3390/v13010001.

    PMID: 33374895

This page explains the potential causes and genetics of Septo-Optic Dysplasia for educational purposes only. Always consult a pediatric neurologist or geneticist to discuss your child's specific diagnosis and care plan.

Get notified when new evidence is published on Septo-optic dysplasia spectrum.

We monitor PubMed for new peer-reviewed studies on this topic and email a short summary when something meaningful changes.