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Pediatric Hematology · Severe congenital neutropenia-developmental delay syndrome

Understanding Your Child's Diagnosis: SRP54 Deficiency

At a Glance

SRP54 deficiency is a rare genetic disorder that may cause severe neutropenia from infancy, developmental delays, and a pancreas that makes too few digestive enzymes. Care is individualized and may include G-CSF, regular monitoring, genetic counseling, and specialist support.

Receiving a diagnosis of SRP54 deficiency—also known as severe congenital neutropenia-developmental delay syndrome—can feel overwhelming [1]. This is an exceptionally rare condition, with only a small number of cases (roughly 38) formally documented in the medical literature as of 2023 [2]. Because it is so rare, your local pediatrician likely has never seen a case before, and even specialized hematologists may only know of it through research papers.

This diagnosis means your child’s medical team has identified a pathogenic variant (a disease-causing mutation) in their SRP54 gene. This gene provides instructions for a protein that helps transport other proteins within cells [3]. When it doesn’t work correctly, it creates cellular stress, particularly in the bone marrow and the pancreas [4].

Understanding the Primary Features

SRP54 deficiency is a multi-system disorder, meaning it can affect several different parts of the body. While every child is different, the condition often involves three main areas (though not every child will have all three):

1. Severe Congenital Neutropenia (SCN)

This is the core feature of the disorder. Neutropenia is a condition where the body has too few neutrophils, a type of white blood cell essential for fighting bacterial infections [1].

  • Early Onset: This typically appears within the first few months of life [5].
  • Bone Marrow Findings: In many cases, the bone marrow shows maturation arrest, which means the white blood cells start to grow but get stuck at an early stage and never become mature, functional cells [6].
  • Treatment Response: Most children with this condition require a medication called G-CSF (granulocyte colony-stimulating factor) to boost their white blood cell counts. Interestingly, while many children respond poorly to this treatment, some with specific mutations (like the p.T117del variant) have shown a very strong response [5][6].

2. Neurodevelopmental Delay

Many children with SRP54 deficiency experience delays in reaching developmental milestones [3]. This can include:

  • Delays in motor skills (like sitting up or walking).
  • Delays in speech and language development.
  • Other cognitive or learning challenges.

The degree of delay varies significantly from one child to another. Because the condition was only recently discovered (around 2017), doctors are still learning about the long-term developmental outlook [1].

3. Exocrine Pancreatic Insufficiency (EPI)

Some children have a “Shwachman-Diamond-like” presentation, meaning their symptoms overlap with a more well-known rare disease called Shwachman-Diamond Syndrome [3].

  • What it is: In EPI, the pancreas does not produce enough enzymes to properly digest food, especially fats [1].
  • Signs: This can lead to oily stools, stomach pain, and difficulty gaining weight (failure to thrive).

Why This Happened

In most reported cases, the mutation in the SRP54 gene is de novo, meaning it happened spontaneously in the child and was not inherited from either parent [1]. It is an autosomal dominant condition, which means only one copy of the mutated gene is needed to cause the syndrome [3]. Even if the mutation is de novo, doctors often recommend genetic counseling for parents to understand the very small but non-zero chance of recurrence due to germline mosaicism (where a small percentage of a parent’s reproductive cells carry the mutation).

Navigating the Unknown

Because there are so few known cases, there is no single roadmap for treatment. Instead, care is usually tailored to each child’s specific symptoms.

  • Specialized Care: It is common for families to seek care at major academic medical centers or specialized bone marrow failure clinics, where doctors have more experience with rare genetic blood disorders [7].
  • Research Opportunities: Organizations like the Shwachman-Diamond Syndrome Alliance include SRP54 deficiency in their research and support networks, providing a way for families to connect and participate in global patient surveys to help scientists learn more about the disease [NCT06999954].

While the rare nature of this diagnosis is daunting, the identification of the SRP54 gene allows doctors to move away from a mystery diagnosis toward targeted monitoring and specialized support for your child’s specific needs.

Common questions in this guide

What is SRP54 deficiency in children?
SRP54 deficiency is a rare genetic condition caused by a disease-causing change in the SRP54 gene. It most often affects the bone marrow and can also affect development and the pancreas, so children may need care from several specialists.
What problems can SRP54 deficiency cause?
The condition can cause severe congenital neutropenia, developmental delay, and, in some children, exocrine pancreatic insufficiency. Neutropenia may begin in the first months of life, while children may also have motor or speech delays, oily stools, stomach pain, or difficulty gaining weight.
Is SRP54 deficiency inherited from a parent?
Most reported SRP54 variants have arisen de novo, meaning they occurred in the child and were not inherited from either parent. Because a small recurrence risk can remain if a parent has germline mosaicism, genetic counseling and parent testing may be recommended.
How is the low neutrophil count treated?
Many children need G-CSF, a medicine that stimulates the bone marrow to make more neutrophils. Response varies, and some specific SRP54 variants, including p.T117del, have been associated with a particularly strong response.
Does every child with SRP54 deficiency have pancreatic insufficiency?
No. Some children develop exocrine pancreatic insufficiency, in which the pancreas does not make enough digestive enzymes, while others do not have this feature. Oily stools, stomach pain, or poor weight gain should prompt discussion with the child's medical team and possibly a pediatric gastroenterologist.
What specialists and monitoring might my child need?
Care is individualized and may involve a pediatric hematologist, genetic specialist, and pediatric gastroenterologist. Doctors may monitor blood counts, consider bone marrow evaluations, assess development and digestion, and refer families to a specialized bone marrow failure center.

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References

References (7)
  1. 1

    Mutations in signal recognition particle SRP54 cause syndromic neutropenia with Shwachman-Diamond-like features.

    Carapito R, Konantz M, Paillard C, et al.

    The Journal of clinical investigation 2017; (127(11)):4090-4103.

    PMID: 28972538
  2. 2

    Severe congenital neutropenia, SRP54 pathogenicity, and a framework for surveillance.

    Fan EM, Vagher J, Meznarich JA, et al.

    American journal of medical genetics. Part A 2023; (191(5)):1434-1441 doi:10.1002/ajmg.a.63156.

    PMID: 36815775
  3. 3

    Structural and Functional Impact of SRP54 Mutations Causing Severe Congenital Neutropenia.

    Juaire KD, Lapouge K, Becker MMM, et al.

    Structure (London, England : 1993) 2021; (29(1)):15-28.e7 doi:10.1016/j.str.2020.09.008.

    PMID: 33053321
  4. 4

    SRP54 mutations induce congenital neutropenia via dominant-negative effects on XBP1 splicing.

    Schürch C, Schaefer T, Müller JS, et al.

    Blood 2021; (137(10)):1340-1352 doi:10.1182/blood.2020008115.

    PMID: 33227812
  5. 5

    Case Report: Association between cyclic neutropenia and SRP54 deficiency.

    Erdős M, Boyarchuk O, Maródi L

    Frontiers in immunology 2022; (13()):975017 doi:10.3389/fimmu.2022.975017.

    PMID: 36159802
  6. 6

    Congenital neutropenia with variable clinical presentation in novel mutation of the SRP54 gene.

    Goldberg L, Simon AJ, Rechavi G, et al.

    Pediatric blood & cancer 2020; (67(6)):e28237 doi:10.1002/pbc.28237.

    PMID: 32277798
  7. 7

    Title not available

    Kasmi Z, El Bakkouri J, Ailal F, et al.

    La Tunisie medicale 2023; (101(7)):591-596.

    PMID: 38445418

This page is for informational purposes only and does not constitute medical advice about your child's SRP54 deficiency. Your child's hematology, genetics, and gastroenterology teams should interpret the diagnosis and recommend individualized care.